Overview: The condition, causes and diagnosis

  • Hypothyroidism is a condition where the thyroid gland does not make enough thyroid hormone to keep the body running smoothly.
  • Thyroid hormone oversees your rate of metabolism, regulates temperature, and is involved with brain, heart, muscles and how organ systems work. 
  • Common symptoms: fatigue, weight gain, hair loss, dry skin, depression, menstrual irregularities, gastrointestinal symptoms, sleep and cognition issues.
  • Diagnosis is found where symptoms arise and blood tests confirm irregularities. Common tests are: free thyroxine (T4) and free triiodothyronine (T3), both produced by the thyroid itself, and thyroid-stimulating hormone (TSH) produced by the pituitary gland. 
  • Additional blood tests measure thyroid antibodies, anti-thyroid peroxidase (anti-TPO), and anti-thyroglobulin (anti-TG) which can help confirm or rule out an autoimmune thyroid disease process causing hypothyroidism.


The current conventional medical treatment for hypothyroidism is daily thyroid hormone supplementation with synthetic levothyroxine (T4), liothyronine (T3), or natural desiccated thyroid (T4 and T3) to correct low levels. Treatment is effective for some patients. For those with Hashimoto’s, taking thyroid hormone alone does not fully address the underlying cause of dysfunction. While trying to establish the correct dosage of medication some patients experience a yo-yo effect of symptoms. Other individuals do not tolerate or cannot absorb thyroid hormone well.

Naturopathic doctors treat hypothyroidism from the root of the problem. Naturopathic doctors are trained in the pharmacological treatments commonly prescribed by conventionally trained providers, and in some states, prescribe pharmaceuticals when necessary. However, NDs rarely use medication as an initial or stand-alone treatment. NDs individualize treatment using diet, nutritional supplementation and botanical medicine as indicated.

If autoimmune disease is the main cause of thyroid dysfunction, NDs work to help control inflammation and eliminate autoimmune triggers. 

If the thyroid is just not producing enough thyroid hormone, NDs address lifestyle and environmental factors that may be contributing to low production. 

Although every hypothyroid treatment is carefully individualized, here are some common natural therapies for hypothyroidism.

  • Diet and Microbiome. Many nutritional factors play a role in optimizing thyroid function. The right diet is important to help prevent and manage conditions accompanying thyroid disease. Research shows that one important factor in autoimmune response is chronic, persistent microbiome imbalance and inflammation in the gut.
  • Naturopathic doctors address microbiome dysfunction with nutritional therapies such as probiotics, cultured foods, and diets lower in sugar, starch, and carbohydrates, which all help to decrease inflammation and balance immunity.
  • Naturopathic doctors test for common nutrient deficiencies associated with hypothyroidism and supplement as needed.
    • Vitamin B-12  helps improve cellular response to thyroid hormone and boosts energy production in cells to help with fatigue and other common symptoms of hypothyroidism.
    • Selenium supports efficient thyroid synthesis and metabolism and has been found in studies to reduce thyroid antibody levels in those with Hashimoto’s.
    • Zinc is beneficial in improving thyroid function and hormone levels and has been shown in studies to have a positive effect on thyroid function in overweight females.
  • Botanical medicine. There are several herbs that have been shown to benefit thyroid function. Herbal treatment recommendations should be approved by a professional trained in herbal medicine to reduce unwanted side effects, prevent unwanted drug/herb interactions and to maximize treatment efficacy.
    • Ashwagandha improves thyroid function for subclinical hypothyroid patients. As an adaptogen, this herb works on several body functions to help balance dysfunction and regulate metabolic processes. Adaptogens are used with caution as some botanicals may stimulate the immune system response. 
    • Gum guggul (Commiphora mukul), can be used in all forms of hypothyroidism as it helps convert an inactive form of T4 to the more active form of T3. Regulation of thyroid function is complicated and requires a whole-person approach. Naturopathic doctors lead with natural therapies that address underlying causes and support the body to restore healthy function.

A service for consumers from the American Association of Naturopathic Physicians (AANP) and the Institute for Natural Medicine (INM).  The INM and AANP would like to acknowledge Jennifer Bennett, ND and Amy Rothenberg, ND, DHANP for their contributions to the content of this article.